oras

oras #61

	name: oras
	# concurrency:
	# group: ${{ github.head_ref \|\| github.run_id }}
	# cancel-in-progress: true

	on:
	# pull_request:
	workflow_dispatch:
	schedule:
	- cron: "30 1 * * *" # at 1.30am
	## these permissions are only for deployment to gh pages
	# permissions:
	# id-token: write
	# pages: write

	jobs:
	run-benchmark-oras:
	name: run_clustbench_oras
	runs-on: ubuntu-latest
	# runs-on: self-hosted
	strategy:
	matrix:
	ob_branch: [main]
	micromamba-version: ['2.1.1-0']
	fail-fast: false
	concurrency:
	group: oras-${{ matrix.micromamba-version }}-${{ matrix.ob_branch }}
	cancel-in-progress: false # true
	steps:
	- name: Check out repository
	uses: actions/checkout@v4

	- uses: eWaterCycle/setup-apptainer@v2
	with:
	apptainer-version: 1.4.0

	- name: Install ob (with) micromamba
	uses: mamba-org/setup-micromamba@v2
	with:
	cache-environment: false # true
	micromamba-version: ${{ matrix.micromamba-version }}
	download-micromamba: true
	micromamba-binary-path: ${{ runner.temp }}/bin/micromamba-${{ matrix.micromamba-version }}/micromamba
	environment-name: test-env-${{matrix.ob_branch }}-${{ matrix.micromamba-version }}
	create-args: >-
	python=3.12
	pip
	conda
	post-cleanup: environment # all

	- name: Overwrite omnibenchmark CLI to branch
	shell: bash -l {0}
	run: \|
	micromamba --version
	pip install git+https://github.com/omnibenchmark/omnibenchmark.git@${{ matrix.ob_branch }}

	- name: Run benchmark
	shell: bash -l {0}
	run: \|
	ob run benchmark -b Clustering_oras.yml --local --cores 10 --yes

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