easyQTLseq 1.1.0

Previous release will not calculate QTL region if no parent information is presented.
easyQTLseq 1.1.0 introduces a new feature: when using the Euclidean Distance (ED) algorithm, it now identifies QTL regions. Specifically, regions where the ED⁴ value exceeds the mean of ED⁴ plus three times the variance of ED⁴ are considered QTL regions.

$$\text{QTL region} = \left\{ x \mid \mathrm{ED}^4(x) > \overline{\mathrm{ED}^4} + 3 \cdot \mathrm{Var}(\mathrm{ED}^4) \right\}$$

easyQTLseq 1.0.0

First release of easyQTLseq.

This R package is used for QTL-seq analysis. It can handle different situations.

• Both parents, only one parent or none parent is sequenced is ok;
• One of the parents has a reference genome used in variantion-calling.
  The candidate QTL interval will be calculated only if at least one parent has sequencing data or reference genome.