Platt

See the Platt website for a more comprehensive introduction.

Installation

Platt runs in the R statistical computing environment. It requires R >= 3.5.0. Platt is currently only available for Github install.

Required software

Platt builds on top of the Hooke package.

devtools::install_github("cole-trapnell-lab/hooke")

Hooke builds on top of the Monocle3 package.

devtools::install_github("cole-trapnell-lab/monocle3", ref="develop")

Hooke depends on the PLNmodels package.

remotes::install_github("pln-team/PLNmodels")

Finally, install the Platt package as follows:

devtools::install_github("cole-trapnell-lab/platt")