Popular repositories Loading

1. Peptide_Graph_Autograd Peptide_Graph_Autograd Public

   Python 2 2

2. VSEPR_Encoding VSEPR_Encoding Public

   Convert Peptide/Protein Sequences to VSEPR structure

   Python 1

3. Binding-Affinity-Prediction Binding-Affinity-Prediction Public

   Populate Similarity and Position Specific Frequency Matrices that allow for accurate prediction of peptide binding affinities.

   Python 1 1

4. HSFC_MD HSFC_MD Public

   Hilbert Space Filling Curves applied to Molecular Dynamics Trajectories

   Python 1

5. Iterative-Alignment Iterative-Alignment Public

   This program is designed to randomly perturb a given Amino Acid Similarity matrix and maximize the similarity (calculated via the Needleman-Wunsch algorithm) between sequences having high and low a…

   Python

6. Iterative-Alignment-Gapless Iterative-Alignment-Gapless Public

   This version of Iterative Alignment excludes the calculation of the optimal alignment between sequences and scores them only based on the composition per position in the peptide sequence.

   Python