Skip to content

Conversation

@r-ryantm
Copy link
Contributor

Automatic update generated by nixpkgs-update tools. This update was made based on information from passthru.updateScript.

meta.description for python3Packages.medvol is: Wrapper for loading medical 3D image volumes such as NIFTI or NRRD images

meta.homepage for python3Packages.medvol is: https://github.com/MIC-DKFZ/medvol

meta.changelog for python3Packages.medvol is: https://github.com/MIC-DKFZ/MedVol/releases/tag/v0.0.17

Updates performed
  • Ran passthru.UpdateScript
To inspect upstream changes
Impact

Checks done


  • built on NixOS
  • The tests defined in passthru.tests, if any, passed
  • found 0.0.17 with grep in /nix/store/k9qmqpx158w0yjlxmrzjwvmy78imd97g-python3.13-medvol-0.0.17
  • found 0.0.17 in filename of file in /nix/store/k9qmqpx158w0yjlxmrzjwvmy78imd97g-python3.13-medvol-0.0.17

Rebuild report (if merged into master) (click to expand)
7 total rebuild path(s)

7 package rebuild(s)

First fifty rebuilds by attrpath

pkgsRocm.python3Packages.medvol
pkgsRocm.python3Packages.napari-nifti
python312Packages.medvol
python312Packages.napari-nifti
python313Packages.medvol
python313Packages.napari-nifti
Instructions to test this update (click to expand)

Either download from the cache:

nix-store -r /nix/store/k9qmqpx158w0yjlxmrzjwvmy78imd97g-python3.13-medvol-0.0.17 \
  --option binary-caches 'https://cache.nixos.org/ https://nixpkgs-update-cache.nix-community.org/' \
  --option trusted-public-keys '
  nixpkgs-update-cache.nix-community.org-1:U8d6wiQecHUPJFSqHN9GSSmNkmdiFW7GW7WNAnHW0SM=
  cache.nixos.org-1:6NCHdD59X431o0gWypbMrAURkbJ16ZPMQFGspcDShjY=
  '

(The nixpkgs-update cache is only trusted for this store-path realization.)
For the cached download to work, your user must be in the trusted-users list or you can use sudo since root is effectively trusted.

Or, build yourself:

nix-build -A python3Packages.medvol https://github.com/r-ryantm/nixpkgs/archive/73784fbaea5e5223ceb62bba53da462ef4f3d895.tar.gz

Or:

nix build github:r-ryantm/nixpkgs/73784fbaea5e5223ceb62bba53da462ef4f3d895#python3Packages.medvol

After you've downloaded or built it, look at the files and if there are any, run the binaries:

ls -la /nix/store/k9qmqpx158w0yjlxmrzjwvmy78imd97g-python3.13-medvol-0.0.17
ls -la /nix/store/k9qmqpx158w0yjlxmrzjwvmy78imd97g-python3.13-medvol-0.0.17/bin


Pre-merge build results

We have automatically built all packages that will get rebuilt due to
this change.

This gives evidence on whether the upgrade will break dependent packages.
Note sometimes packages show up as failed to build independent of the
change, simply because they are already broken on the target branch.

nixpkgs-review result

Generated using nixpkgs-review.

Command: nixpkgs-review --extra-nixpkgs-config '{ allowBroken = false; }'
Commit: 73784fbaea5e5223ceb62bba53da462ef4f3d895


x86_64-linux

✅ 8 packages built:
  • python312Packages.medvol
  • python312Packages.medvol.dist
  • python312Packages.napari-nifti
  • python312Packages.napari-nifti.dist
  • python313Packages.medvol
  • python313Packages.medvol.dist
  • python313Packages.napari-nifti
  • python313Packages.napari-nifti.dist

Maintainer pings

cc @bcdarwin for testing.

Tip

As a maintainer, if your package is located under pkgs/by-name/*, you can comment @NixOS/nixpkgs-merge-bot merge to automatically merge this update using the nixpkgs-merge-bot.


Add a 👍 reaction to pull requests you find important.

@nixpkgs-ci nixpkgs-ci bot requested a review from bcdarwin December 12, 2025 04:24
@nixpkgs-ci nixpkgs-ci bot added 10.rebuild-linux: 1-10 This PR causes between 1 and 10 packages to rebuild on Linux. 10.rebuild-darwin: 0 This PR does not cause any packages to rebuild on Darwin. 6.topic: python Python is a high-level, general-purpose programming language. labels Dec 12, 2025
Sign up for free to join this conversation on GitHub. Already have an account? Sign in to comment

Labels

6.topic: python Python is a high-level, general-purpose programming language. 10.rebuild-darwin: 0 This PR does not cause any packages to rebuild on Darwin. 10.rebuild-linux: 1-10 This PR causes between 1 and 10 packages to rebuild on Linux.

Projects

None yet

Development

Successfully merging this pull request may close these issues.

1 participant