remove test assert absence FILTER column because now needed for breakend pairing

qclayssen · qclayssen · commit b0cfc8e7e3ab · 2025-08-28T16:28:09.000+10:00
diff --git a/tests/test_smlv_somatic_filter.py b/tests/test_smlv_somatic_filter.py
@@ -201,7 +201,6 @@ def test_clinical_potential_rescue_general(self):
                 info_data=info_data_set,
             )
             smlv_somatic_filter.set_filter_data(record, 0)
-            assert not record.FILTER
             assert record.INFO.get(rescue_tag_str) is not None
 
 

Original file line number	Diff line number	Diff line change
`@@ -201,7 +201,6 @@ def test_clinical_potential_rescue_general(self):`
`201`	`201`	`info_data=info_data_set,`
`202`	`202`	`)`
`203`	`203`	`smlv_somatic_filter.set_filter_data(record, 0)`
`204`		`- assert not record.FILTER`
`205`	`204`	`assert record.INFO.get(rescue_tag_str) is not None`
`206`	`205`
`207`	`206`