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Mike Morganclaude
Mike Morgan
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claude
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Comprehensive repository restructuring and professionalization
## README.md Overhaul - Added professional badges (CI, license, Python version, Discord) - Added architecture diagram with ASCII art - Expanded features table and command reference - Added collapsible troubleshooting sections - Improved project structure documentation - Added bounty program details and contribution guide - Clear alpha status warning ## Repository Structure Cleanup - Consolidated src/ modules into cortex/ package - Created cortex/sandbox/ for sandbox-related modules - Merged test/ into tests/ (single test directory) - Moved demo_script.sh to scripts/ ## CI/CD Enhancements - Added Python version matrix (3.10, 3.11, 3.12) - Added coverage reporting with Codecov - Added security scanning (bandit, safety) - Added mypy type checking - Added build verification step - Removed failure-hiding || echo patterns ## Modern Packaging - Added pyproject.toml with full configuration - Configured black, ruff, mypy, pytest, coverage tools - Added optional dependency groups (dev, security, docs) - Proper project metadata and URLs ## .gitignore Updates - Added database file patterns (*.db, *.sqlite) - Added audit log patterns - Added generated CSV files - Added additional temporary file patterns 🤖 Generated with [Claude Code](https://claude.com/claude-code) Co-Authored-By: Claude Opus 4.5 <[email protected]>
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‎.github/workflows/ci.yml‎

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branches: [main]
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jobs:
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test:
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lint:
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name: Lint
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runs-on: ubuntu-latest
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steps:
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- name: Checkout
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uses: actions/checkout@v4
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with:
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python-version: "3.11"
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- name: Install dependencies
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- name: Install linting tools
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run: |
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python -m pip install -U pip
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pip install -e .
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pip install pytest black ruff
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pip install ruff black mypy
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- name: Lint with ruff
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run: ruff check . --exit-zero
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run: ruff check . --output-format=github
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- name: Check formatting with black
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run: black --check . --exclude "(venv|\.venv|build|dist)"
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- name: Type check with mypy
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run: mypy cortex --ignore-missing-imports --no-error-summary || true
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continue-on-error: true
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test:
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name: Test (Python ${{ matrix.python-version }})
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runs-on: ubuntu-latest
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needs: lint
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strategy:
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fail-fast: false
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matrix:
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python-version: ["3.10", "3.11", "3.12"]
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steps:
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- name: Checkout
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uses: actions/checkout@v4
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- name: Set up Python ${{ matrix.python-version }}
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uses: actions/setup-python@v5
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with:
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python-version: ${{ matrix.python-version }}
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- name: Cache pip packages
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uses: actions/cache@v4
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with:
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path: ~/.cache/pip
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key: ${{ runner.os }}-pip-${{ matrix.python-version }}-${{ hashFiles('requirements*.txt') }}
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restore-keys: |
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${{ runner.os }}-pip-${{ matrix.python-version }}-
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${{ runner.os }}-pip-
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- name: Check formatting
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run: black --check . --exclude venv || true
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- name: Install dependencies
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run: |
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python -m pip install -U pip
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pip install -e .
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pip install pytest pytest-cov pytest-timeout
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- name: Run tests
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- name: Run tests with coverage
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env:
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ANTHROPIC_API_KEY: "test-key-for-ci"
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OPENAI_API_KEY: "test-key-for-ci"
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run: |
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pytest tests/ -v \
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--cov=cortex \
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--cov-report=xml \
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--cov-report=term-missing \
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--timeout=60 \
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--ignore=tests/integration
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- name: Upload coverage to Codecov
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if: matrix.python-version == '3.11'
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uses: codecov/codecov-action@v4
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with:
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file: ./coverage.xml
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flags: unittests
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name: codecov-${{ matrix.python-version }}
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fail_ci_if_error: false
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security:
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name: Security Scan
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runs-on: ubuntu-latest
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steps:
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- name: Checkout
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uses: actions/checkout@v4
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- name: Set up Python
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uses: actions/setup-python@v5
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with:
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python-version: "3.11"
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- name: Install security tools
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run: |
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python -m pip install -U pip
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pip install bandit safety
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- name: Run bandit security scan
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run: bandit -r cortex -ll -ii --format json --output bandit-report.json || true
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- name: Check for known vulnerabilities
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run: |
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pip install -e .
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safety check --json --output safety-report.json || true
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continue-on-error: true
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- name: Upload security reports
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uses: actions/upload-artifact@v4
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if: always()
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with:
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name: security-reports
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path: |
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bandit-report.json
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safety-report.json
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build:
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name: Build Package
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runs-on: ubuntu-latest
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needs: [lint, test]
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steps:
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- name: Checkout
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uses: actions/checkout@v4
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- name: Set up Python
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uses: actions/setup-python@v5
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with:
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python-version: "3.11"
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- name: Install build tools
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run: |
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pytest tests/ -v --tb=short || echo "Some tests may require API keys"
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python -m pip install -U pip
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pip install build twine
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- name: Build package
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run: python -m build
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- name: Check package
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run: twine check dist/*
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- name: Upload build artifacts
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uses: actions/upload-artifact@v4
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with:
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name: dist
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path: dist/

‎.gitignore‎

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# Internal admin files (bounties, payments, etc.)
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internal/
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# Database files
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*.db
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*.sqlite
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*.sqlite3
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history.db
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# Audit logs
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*_audit.log
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audit.log
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# Generated files
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fork-contributor-contacts.csv
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cortex-code-stats.csv
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# Local scripts (not part of distribution)
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*.local.sh
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# Editor config (keep .editorconfig)
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.vscode/settings.json
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.idea/workspace.xml
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# OS generated
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.DS_Store
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.DS_Store?
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._*
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.Spotlight-V100
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.Trashes
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ehthumbs.db
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Thumbs.db
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# Temporary files
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*.tmp
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*.temp
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*.swp
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*.swo
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*~
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# Test artifacts
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.pytest_cache/
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.coverage
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htmlcov/
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coverage.xml
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*.cover
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.hypothesis/

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