Skip to content

Commit 244ebbb

Browse files
committed
Bump version number, update changelog
1 parent 342e743 commit 244ebbb

File tree

2 files changed

+36
-2
lines changed

2 files changed

+36
-2
lines changed

CHANGELOG.md

Lines changed: 35 additions & 1 deletion
Original file line numberDiff line numberDiff line change
@@ -2,6 +2,41 @@
22

33
## v0.X Series
44

5+
### v0.11.28 (2022-04-08)
6+
7+
New features:
8+
* Added `Solver.setSteadyStateToleranceFactor` and
9+
`Solver.setSteadyStateSensiToleranceFactor` to specify a steady state
10+
tolerance factor by @dilpath in https://github.com/AMICI-dev/AMICI/pull/1758
11+
12+
**NOTE: This also relaxed the default steady state (sensitivity)**
13+
**tolerances by a factor of 100.**
14+
* Added support for `pathlib.Path` by @dweindl in
15+
https://github.com/AMICI-dev/AMICI/pull/1769
16+
* Allow specifying initial timepoint with `ExpData` by @dilpath in
17+
https://github.com/AMICI-dev/AMICI/pull/1776
18+
19+
Performance:
20+
* Speedup for models with conservation laws by @FFroehlich in
21+
https://github.com/AMICI-dev/AMICI/pull/1765
22+
* Improved efficiency of newton step convergence check by @FFroehlich in
23+
https://github.com/AMICI-dev/AMICI/pull/1775
24+
25+
Fixes:
26+
* Fixed deprecation warning for pandas.DataFrame.append in
27+
`rdatas_to_measurement_df` by @dweindl in
28+
https://github.com/AMICI-dev/AMICI/pull/1770
29+
* Fixed Rule-target handling in PEtab import by @dweindl in
30+
https://github.com/AMICI-dev/AMICI/pull/1753
31+
32+
Removed functionality:
33+
* Removed long deprecated `sbml2amici` arguments `modelName`
34+
and `constantParameters` by @dweindl in
35+
https://github.com/AMICI-dev/AMICI/pull/1774
36+
37+
**Full Changelog**:
38+
https://github.com/AMICI-dev/AMICI/compare/v0.11.27...v0.11.28
39+
540
### v0.11.27 (2022-04-04)
641

742
New features:
@@ -24,7 +59,6 @@ Performance:
2459
* Optional parallel computation of derivatives during model import by @dweindl
2560
in https://github.com/AMICI-dev/AMICI/pull/1740
2661
* Sparsify jacobian by @FFroehlich in https://github.com/AMICI-dev/AMICI/pull/1766
27-
* Speedup for models with conservation laws by @FFroehlich in https://github.com/AMICI-dev/AMICI/pull/1765
2862
* Speedup conservation law computation by @FFroehlich in
2963
https://github.com/AMICI-dev/AMICI/pull/1754
3064
* Exploit stoichiometric matrix in pysb import by @FFroehlich in

version.txt

Lines changed: 1 addition & 1 deletion
Original file line numberDiff line numberDiff line change
@@ -1 +1 @@
1-
0.11.27
1+
0.11.28

0 commit comments

Comments
 (0)